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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903043.1_cds_XP_016453022.1_47192
CDS Infomation

[gene=LOC107777501] [db_xref=GeneID:107777501] [protein=aspartic proteinase-like protein 1 isoform X1] [protein_id=XP_016453022.1] [location=complement(join(134614..134855,135581..135652,135754..135814,136838..136937,137016..137080,137217..137355,137452..137679,137991..138232,139256..139394,140369..140664))] [gbkey=CDS]
Sequence

ATGGAGATTCGTTTCATGGTTTTTGTACTGACGGCGGCTTTGATGCTTTCCGTTGAGCTA
GCCGCCGGCGGGACCTTCTCGTCGAGGTTGATTCACGGGTACTCAGACGAAGCGATGTCG
TTTTGGGCATCTAAAGGGAAGAGCGTGACGTGTCCGAAGCGCGAAAGTGTGGAGCACATG
AGGTTGCTTCTTAGCAATGATTTGAAGCGCCAGAGACTAAAGCTTGGCTTGCAGAAACAG
CTCTTGTTTCCTTCTGAAGGAAGCAAAACTCATTTCTACGGCAACGACTTGAGTTGGCTA
CATTATGCGTGGATTGACATAGGGACGCCAAATGCATCATTTCTTGTCGCCTTGGATGCT
GGAAGCGATCTGCTTTGGGTCCCTTGTGATTGTGTACAATGTGCTCCATTGTCTTCAAGC
TACTACTCAATGTTGGATAAAGATCTGAACGAGTATAGCCCAACACGATCAAGCACAAGC
AAGCATCTATCTTGCAGCAATCGATTATGTGAACTGGGTCCTAACTGCCAGAGTCCAAAG
GAACGATGCCCTTACACTGTTAACTATTATTCTGAAAATACATCAAGTTCGGGTTTTCTT
TTTGAGGACCAATTGCATATGACTTCAGTTGGTGGACATGAACATCAAGGTTCTGTGCTA
GCTCCTATCATTATAGGGTGTGGTAGCAAACAAAGTGGCAGTTATTTGAATGGAGCTGCT
CCAGATGGGGTGATGGGATTAGGACCAGGAGAAATTTCTGTTCCAAGTTTGCTGGCGAAG
TCTGGATTTGTTCCACATTCATTCTCATTATGTTTTGACAAGAGCAATTCTGGCACAATT
TTCTTTGGTGATCAAGGGCCTGAAAATCAAAGACTAAGTTCATTTGTATCTTTGGATGGA
AACTACAATACCTATATTGTTGAAGTCCAACGTTACTGTTTGGGGGGTACCTGTCTAAAG
CAAAATGGATTTCAAGCCTTAGTTGATAGTGGGTCTTCCTTCACTTATCTCCCTTCCGAA
ATCTTTACAAAAGTAGTAACTGAGTTTGAAGAGCAAATAAATGCTACAAGGTTAGCTACA
GAAGATTTTCCTTACTGCTACAAGGCTAGTTCACAAGGTTTACCAAACATTCCTAGCATG
AAACTTGTGTTAGCTGCTAACCAGAGCTTTGTAATTCAGAACCCCGTGTTTACCATCTCC
AGTGGTCAGGGCGATAACTTTTATTGTGTAGGTATCCTACCTATTGAGGGAATGATTGGT
ATTATTGGACAAAACCTTATGCAGGGATATCGAATGGTGTTTGATTGGGAAAACATGAAG
TTGGGTTGGTCTTACTCCAAGTGTCAAGACATAGGCGGGAGTGCAAAGGTACCACCAACA
CCACCTCCGAGTGGTTTAGCATCAAATCCATTGCCAACAAATGAGCAACAAAGAAACCCT
GGTGGACATGCAGTTGCACCTGCCATTGCCGGTAAAGCTACCCTTAAACCATCTGCAGCA
TCGCTTCATGCTGTTTCATGCCGGCATTGCGCTATGAGTTATCTTCTACTTTCGTTGGTT
CTATGGTTACCTTATCTGATATAA

Peptide Sequence

PEP ID

XP_016453022.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 1 isoform X1 [Nicotiana tabacum]
Sequence

MEIRFMVFVLTAALMLSVELAAGGTFSSRLIHGYSDEAMSFWASKGKSVTCPKRESVEHM
RLLLSNDLKRQRLKLGLQKQLLFPSEGSKTHFYGNDLSWLHYAWIDIGTPNASFLVALDA
GSDLLWVPCDCVQCAPLSSSYYSMLDKDLNEYSPTRSSTSKHLSCSNRLCELGPNCQSPK
ERCPYTVNYYSENTSSSGFLFEDQLHMTSVGGHEHQGSVLAPIIIGCGSKQSGSYLNGAA
PDGVMGLGPGEISVPSLLAKSGFVPHSFSLCFDKSNSGTIFFGDQGPENQRLSSFVSLDG
NYNTYIVEVQRYCLGGTCLKQNGFQALVDSGSSFTYLPSEIFTKVVTEFEEQINATRLAT
EDFPYCYKASSQGLPNIPSMKLVLAANQSFVIQNPVFTISSGQGDNFYCVGILPIEGMIG
IIGQNLMQGYRMVFDWENMKLGWSYSKCQDIGGSAKVPPTPPPSGLASNPLPTNEQQRNP
GGHAVAPAIAGKATLKPSAASLHAVSCRHCAMSYLLLSLVLWLPYLI

Transcript Sequence

Gene sequence data has not been registered.